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    <p>The STL priority queue implementation is fairly well-optimized for what it does, but certain kinds of heaps have special properties that can improve your performance on certain algorithms. Fibonacci heaps are one example. Also, if you're storing objects with a small key and a large amount of satellite data, you'll get a major improvement in cache performance if you store that data separately, even if it means storing one extra pointer per object.</p> <p>As for arrays, I've found std::vector to even slightly out-perform compile-time-constant arrays. That said, its optimizations are general, and specific knowledge of your algorithm's access patterns may allow you to optimize further for cache locality, alignment, coloring, etc. If you find that your performance drops significantly past a certain threshold due to cache effects, hand-optimized arrays may move that problem size threshold by as much as a factor of two in some cases, but it's unlikely to make a huge difference for small inner loops that fit easily within the cache, or large working sets that exceed the size of any CPU cache. Work on the priority queue first.</p> <p>Most of the overhead of dynamic memory allocation is constant with respect to the size of the object being allocated. Allocating one large object and returning it by a pointer isn't going to hurt much as much as copying it. The threshold for copying vs. dynamic allocation varies greatly between systems, but it should be fairly consistent within a chip generation.</p> <p>Compilers are quite cache-aware when cpu-specific tuning is turned on, but they don't know the size of the cache. If you're optimizing for cache size, you may want to detect that or have the user specify it at run-time, since that will vary even between processors of the same generation.</p> <p>As for floating point, you absolutely should be using SSE. This doesn't necessarily require learning SSE yourself, as there are many libraries of highly-optimized SSE code that do all sorts of important scientific computing operations. If you're compiling 64-bit code, the compiler might emit some SSE code automatically, as SSE2 is part of the x86_64 instruction set. SSE will also save you some of the overhead of x87 floating point, since it's not converting back and forth to 80-bit values internally. Those conversions can also be a source of accuracy problems, since you can get different results from the same set of operations depending on how they get compiled, so it's good to be rid of them.</p>
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