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POIntel c/c++ compiler: "could not locate executable icc" (and ecc)
 

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  1. POIntel c/c++ compiler: "could not locate executable icc" (and ecc)
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    <p>I recently installed a Intel's c/c++ compiler for linux: "Intel® C++ Composer XE for Linux".</p> <p>When i was doing the installation, only marked the options(or packages) relates to the compiler and debugger, and said to the instaler that i will compile 64bit aplications.</p> <p>Now when i try to compile a program i get:</p> <p>meniwis@meniwis-Satellite-L845:~/syscave/src/c-ext/code$ ./build.sh</p> <pre><code>Could not locate executable icc Could not locate executable ecc INFO:root:using /opt/alges/ as sqlite3 directory INFO:root:using /opt/alges/ as HDF5 directory running build_ext running build_src build_src building extension "cvoronoi" sources building extension "cflowsim" sources build_src: building npy-pkg config files customize IntelCCompiler customize IntelCCompiler using build_ext customize IntelCCompiler customize IntelCCompiler using build_ext building 'cvoronoi' extension compiling C++ sources C compiler: icc -fPIC compile options: '-g -I/home/meniwis/syscave/src/c-ext/code/../include - I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c' icc: /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp sh: 1: icc: not found sh: 1: icc: not found error: Command "icc -fPIC -g -I/home/meniwis/syscave/src/c-ext/code/../include - I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp -o build/temp.linux-x86_64- 2.7/home/meniwis/syscave/src/c-ext/code/cvoronoi.o" failed with exit status 127 </code></pre> <p>Making a "step-by-step" of what i am doing:</p> <p>In comand line i type:</p> <pre><code>meniwis@meniwis-Satellite-L845:~/syscave/src/c-ext/code$ ./build.sh </code></pre> <p>The "build.sh" file is the next:</p> <pre><code>export HDF5_DIR=/opt/alges/ export SQLITE3_DIR=/opt/alges/ export SYSCAVE_ROOT=/home/meniwis/syscave/ python setup.py build_ext --inplace </code></pre> <p>A part of the "setup.py" file:</p> <pre><code>. . . voronoi_src_dir=abspath(pjoin(syscave_root,'src/c-ext/code')) cflowsim_src_dir=abspath(pjoin(syscave_root,'src/c-ext/code/flowsim/code/Flowsim')) extensions = [ Extension('cvoronoi', sources=[ pjoin(voronoi_src_dir,'cvoronoi.cpp'), pjoin(voronoi_src_dir,'VoronoiDiagramGenerator.cpp') ], language = "c++", include_dirs=[pjoin(voronoi_src_dir,'../include')], extra_objects=lib_args['extra_compile_args'] ), Extension('cflowsim', sources=[ pjoin(cflowsim_src_dir,'cflowsim.cpp'), pjoin(cflowsim_src_dir,'parsers.cpp'), pjoin(cflowsim_src_dir,'Cell.cpp'), pjoin(cflowsim_src_dir,'ChunkDriver.cpp'), pjoin(cflowsim_src_dir,'DataLoader.cpp'), pjoin(cflowsim_src_dir,'DisplayResult.cpp'), pjoin(cflowsim_src_dir,'Drawbell.cpp'), pjoin(cflowsim_src_dir,'DrawbellType.cpp'), pjoin(cflowsim_src_dir,'Drawpoint.cpp'), pjoin(cflowsim_src_dir,'ExtractionResult.cpp'), pjoin(cflowsim_src_dir,'Model.cpp'), pjoin(cflowsim_src_dir,'Simulator.cpp'), pjoin(cflowsim_src_dir,'Tracer.cpp'), ], language = "c++", extra_objects=lib_args['extra_compile_args'], **lib_args ) ] #move to packages #all default to ext_dir ext_run_dir=abspath(pjoin(syscave_root,'src/python/syscave/extensions/')) moves=[] for ext in extensions: if ext.name not in moves: moves.append((ext.name,ext_run_dir)) moves.append(None) ext_src_dir=pjoin(syscave_root,'src','c-ext','code') #='.' file_ext='' if os.name=='posix': file_ext='so' build_path=abspath(ext_src_dir) elif os.name=='nt': file_ext='pyd' build_path=abspath(ext_src_dir) else: raise EnvironmentError('Unsupported platform: {0}'.format(os.name)) for i,m in enumerate(moves): if m is None: continue name,new_path=m file_name=".".join([name,file_ext]) file_path_from=os.path.join(build_path,file_name) file_path_to =os.path.join(new_path,file_name) moves[i]=(file_path_from,file_path_to) . . . </code></pre> <p>So the error is that icc and ecc cant be found? or is something else?, and if this is, how i solve it? Any directions?.</p> <p>Thanks in advance. Grettings.</p> <p>---------------------EDIT----------------------------------</p> <hr> <p>After the help of @Vahid abdi, i do the next:</p> <pre><code>export PATH=$PATH:/opt/intel/bin/ </code></pre> <p>Now i get:</p> <pre><code>meniwis@meniwis-Satellite-L845:~/syscave/src/c-ext/code$ ./build.sh Found executable /opt/intel/bin/icc Could not locate executable ecc INFO:root:using /opt/alges/ as sqlite3 directory INFO:root:using /opt/alges/ as HDF5 directory running build_ext running build_src build_src building extension "cvoronoi" sources building extension "cflowsim" sources build_src: building npy-pkg config files customize IntelCCompiler customize IntelCCompiler using build_ext customize IntelCCompiler customize IntelCCompiler using build_ext building 'cvoronoi' extension compiling C++ sources C compiler: icc -fPIC compile options: '-g -I/home/meniwis/syscave/src/c-ext/code/../include - I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c' icc: /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp In file included from /usr/include/c++/4.8/bits/stl_tree.h(61), from /usr/include/c++/4.8/map(60), from /home/meniwis/syscave/src/c- ext/code/../include/VoronoiDiagramGenerator.h(36), from /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp(9): /usr/include/c++/4.8/bits/stl_algobase.h(59): catastrophic error: cannot open source file "bits/c++config.h" #include &lt;bits/c++config.h&gt; ^ compilation aborted for /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp (code 4) In file included from /usr/include/c++/4.8/bits/stl_tree.h(61), from /usr/include/c++/4.8/map(60), from /home/meniwis/syscave/src/c- ext/code/../include/VoronoiDiagramGenerator.h(36), from /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp(9): /usr/include/c++/4.8/bits/stl_algobase.h(59): catastrophic error: cannot open source file "bits/c++config.h" #include &lt;bits/c++config.h&gt; ^ compilation aborted for /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp (code 4) error: Command "icc -fPIC -g -I/home/meniwis/syscave/src/c-ext/code/../include - I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c /home/meniwis/syscave/src/c-ext/code/cvoronoi.cpp -o build/temp.linux-x86_64- 2.7/home/meniwis/syscave/src/c-ext/code/cvoronoi.o" failed with exit status 4 </code></pre> <p>Please help. Thanks in advance.</p>
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