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    <p>My top choice would be JGraph as others have suggested; I am using <a href="http://www.jgraph.com/jgraph5.html" rel="nofollow noreferrer">JGraph5</a> because it is better documented than the newer alternative, <a href="http://www.jgraph.com/jgraphx.html" rel="nofollow noreferrer">JGraphX</a>. EDIT: JGraphX turns out to be the far superior version, despite the lack of documentation. It's not <em>that</em> hard to figure out.</p> <h2>JGraph</h2> <ul> <li><a href="http://www.mxgraph.com/demo/jgraphx/jgraphx.jnlp" rel="nofollow noreferrer">Demonstration app</a></li> <li><a href="http://www.jgraph.com/jgraphfeatures.html" rel="nofollow noreferrer">Feature list</a></li> <li><a href="http://www.jgraph.com/license.html" rel="nofollow noreferrer">Licensing agreement</a></li> </ul> <p>Other alternatives I've researched:</p> <h2>JGraphT</h2> <p>"JGraphT is a free Java graph library that provides mathematical graph-theory objects and algorithms...complete source code included, under the terms of the GNU Lesser General Public License." (<a href="http://jgrapht.sourceforge.net/" rel="nofollow noreferrer">http://jgrapht.sourceforge.net/</a>)</p> <ul> <li><a href="http://jgrapht.sourceforge.net/" rel="nofollow noreferrer">Main project repository</a></li> <li><a href="http://jgrapht.sourceforge.net/visualizations.html" rel="nofollow noreferrer">Example visualizations</a></li> </ul> <h2>JUNG - Java Universal Network/Graph Framework</h2> <p><a href="http://jung.sourceforge.net/" rel="nofollow noreferrer">Main project repository</a></p> <h2>yEd Graph Editor</h2> <ul> <li>Implementation of <a href="http://www.yworks.com/en/products_yfiles_practicalinfo_gallery.html" rel="nofollow noreferrer">yFiles library</a></li> <li><a href="http://www.yworks.com/products/yed/demo/yed.jnlp" rel="nofollow noreferrer">Demonstration Java applet</a></li> <li><a href="http://www.yworks.com/en/products_yed_about.html" rel="nofollow noreferrer">About yEd</a></li> <li>Saves graphs in <a href="http://graphml.graphdrawing.org/" rel="nofollow noreferrer">GraphML</a> format</li> </ul>
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