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    <p>I'd use a custom container view controller. So to your main scene, add a "container view". If your target is iOS6, then when editing your storyboard there is a special "container view" object that you can now drag onto your custom container view controller's scene:</p> <p><img src="https://i.stack.imgur.com/f8UJm.png" alt="container view"></p> <p>If iOS 5, then (a) you have to create the first child scene manually; (b) give it a unique storyboard id (in my example, <code>InitialChild</code>, and (c) you manually instantiate that first child controller and add it as a child programmatically. Thus, assuming you have a <code>UIView</code> called <code>containerView</code> in your custom container view controller's scene, you can have a method like:</p> <pre><code>- (void)addInitialChild { UIViewController *child = [self.storyboard instantiateViewControllerWithIdentifier:@"InitialChild"]; [self addChildViewController:child]; child.view.frame = self.containerView.bounds; [self.containerView addSubview:child.view]; [child didMoveToParentViewController:self]; } </code></pre> <p>When you want to transition to the next scene, subclass your own <code>UIStoryboardSegue</code>:</p> <p>In ReplaceSegue.h:</p> <pre><code>@interface ReplaceSegue : UIStoryboardSegue @end </code></pre> <p>In ReplaceSegue.m</p> <pre><code>@implementation ReplaceSegue - (void)perform { UIViewController *source = self.sourceViewController; UIViewController *destination = self.destinationViewController; UIViewController *container = source.parentViewController; [container addChildViewController:destination]; destination.view.frame = source.view.frame; [source willMoveToParentViewController:nil]; [container transitionFromViewController:source toViewController:destination duration:0.5 options:UIViewAnimationOptionTransitionCrossDissolve animations:^{ } completion:^(BOOL finished) { [source removeFromParentViewController]; [destination didMoveToParentViewController:container]; }]; } @end </code></pre> <p>Then, when doing a segue from the first contained scene to the next, specify a "custom" segue, and use this "ReplaceSegue" as the class (just click on the segue to select it and then look at the "Attributes inspector").</p> <p><img src="https://i.stack.imgur.com/hAifD.png" alt="enter image description here"></p> <p>The resulting storyboard might look like (note the "<code>{}</code>" designation between the various children):</p> <p><img src="https://i.stack.imgur.com/pO2WC.png" alt="containment storyboard"></p> <hr> <p>References:</p> <ul> <li><p>For general discussion of containment, see <a href="http://developer.apple.com/library/ios/documentation/uikit/reference/UIViewController_Class/Reference/Reference.html#//apple_ref/doc/uid/TP40006926-CH3-SW81">Implementing a View Container Controller</a> in the <em>UIViewController Class Reference</em>.</p></li> <li><p>For some details about the implementation, see <a href="http://developer.apple.com/library/ios/featuredarticles/ViewControllerPGforiPhoneOS/CreatingCustomContainerViewControllers/CreatingCustomContainerViewControllers.html#//apple_ref/doc/uid/TP40007457-CH18-SW6">Creating Custom Container View Controllers</a> in the <em>View Controller Programming Guide for iOS.</em></p></li> </ul>
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    1. COexcellent answer, I think I've got the gist of it but I still have one doubt: I can't have Interface Builder to set the rootViewController relationship with the first child. How can you do that?
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    2. CO@Wolfy If you want to add the container to your first scene, when editing a storyboard, if you open the "object library" (you can press control-option-command-3), you'll see a "container view" in that list which you can drag onto your scene.
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    3. COoops, you had that in your answer, my bad!
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