Databases
StackOverflow2013
Postsdbo
POMissing MACHTYPE in makefile
 

Note that there are some explanatory texts on larger screens.

plurals
  1. POMissing MACHTYPE in makefile
    primarykey
    data
    text
    <p>My makefile has the following two lines. </p> <pre><code>$(MACHTYPE)/jkweb.a: $(O) $(MACHTYPE) ar rcus $(MACHTYPE)/jkweb.a $(O) </code></pre> <p>When I echo I can see MACHTYPE is <code>x86_64-pc-linux-gnu</code>. I already have the <code>x86_64-pc-linux-gnu</code> directory in the current directory. But when I type make, it says <code>ar: /jkweb.a: Permission denied</code> which is supposed to be <code>x86_64-pc-linux-gnu/jkweb.a</code>.</p> <p>Why is the MACHTYPE missing?</p> <p>P.S. The software is <a href="http://users.soe.ucsc.edu/~kent/src/" rel="noreferrer">Blat</a>. The <a href="https://lists.soe.ucsc.edu/pipermail/genome/2008-June/016592.html" rel="noreferrer">mailing list</a> suggests change MACHTYPE to x86_64.</p> <pre><code>include ../inc/common.mk O = aliType.o annoColumn.o annoFilter.o annoFormatter.o annoFormatTab.o \ annoGrator.o annoGratorQuery.o annoOption.o annoRow.o annoStreamer.o annoStreamVcf.o \ apacheLog.o asParse.o axt.o axtAffine.o bamFile.o base64.o \ basicBed.o bbiRead.o bbiWrite.o bigBed.o binRange.o bits.o \ blastOut.o blastParse.o boxClump.o boxLump.o bPlusTree.o \ bwgCreate.o bwgQuery.o bwgValsOnChrom.o \ cda.o chain.o chainBlock.o chainConnect.o chainToAxt.o chainToPsl.o \ cheapcgi.o cirTree.o codebias.o colHash.o common.o correlate.o crTree.o \ dgRange.o diGraph.o dlist.o dnaLoad.o dnaMarkov.o dnaMotif.o dnaseq.o \ dnautil.o dsPrint.o dtdParse.o dystring.o \ emblParse.o errCatch.o errabort.o \ fa.o ffAli.o ffScore.o filePath.o fixColor.o flydna.o fof.o \ font/mgCourier10.o font/mgCourier12.o font/mgCourier14.o font/mgCourier18.o \ font/mgCourier24.o font/mgCourier34.o font/mgCourier8.o font/mgHelvetica10.o \ font/mgHelvetica12.o font/mgHelvetica14.o font/mgHelvetica18.o font/mgHelvetica24.o \ font/mgHelvetica34.o font/mgHelvetica8.o font/mgHelveticaBold10.o font/mgHelveticaBold12.o \ font/mgHelveticaBold14.o font/mgHelveticaBold18.o font/mgHelveticaBold24.o \ font/mgHelveticaBold34.o font/mgHelveticaBold8.o font/mgSixhi6.o font/mgSail8.o \ font/mgTimes10.o font/mgTimes12.o font/mgTimes14.o font/mgTimes18.o \ font/mgTimes24.o font/mgTimes34.o font/mgTimes8.o font/mgMenlo12.o \ fuzzyShow.o \ gapCalc.o gdf.o gemfont.o genomeRangeTree.o \ gfNet.o gff.o gff3.o gfxPoly.o gifLabel.o \ hacTree.o hash.o histogram.o hmmPfamParse.o hmmstats.o htmlPage.o htmshell.o \ https.o intExp.o intValTree.o internet.o itsa.o iupac.o \ jointalign.o jpegSize.o keys.o knetUdc.o kxTok.o linefile.o lineFileOnBigBed.o localmem.o log.o \ maf.o mafFromAxt.o mafScore.o md5.o memalloc.o memgfx.o metaWig.o mgCircle.o \ mgPolygon.o mime.o net.o nib.o nibTwo.o nt4.o numObscure.o \ obscure.o oldGff.o oligoTm.o options.o osunix.o pairHmm.o peakCluster.o \ phyloTree.o pipeline.o portimpl.o pngwrite.o psGfx.o psPoly.o pscmGfx.o \ psl.o pslGenoShow.o pslShow.o pslTbl.o pslTransMap.o pthreadWrap.o \ qa.o quickHeap.o quotedP.o \ ra.o rainbow.o rbTree.o rangeTree.o regexHelper.o repMask.o \ rle.o rnautil.o rqlEval.o rqlParse.o rudp.o \ scoreWindow.o seg.o seqOut.o seqStats.o servBrcMcw.o servCrunx.o \ servcis.o servcl.o servmsII.o servpws.o shaRes.o slog.o snof.o \ snofmake.o snofsig.o spaceSaver.o spacedColumn.o spacedSeed.o \ splatAli.o sqlList.o sqlNum.o subText.o sufa.o sufx.o synQueue.o \ tabRow.o textOut.o tokenizer.o trix.o twoBit.o \ udc.o vcf.o vGfx.o vPng.o verbose.o \ wildcmp.o wormdna.o \ xAli.o xa.o xap.o xenshow.o xmlEscape.o xp.o zlibFace.o $(MACHTYPE)/jkweb.a: $(O) $(MACHTYPE) ar rcus $(MACHTYPE)/jkweb.a $(O) $(MACHTYPE): mkdir $(MACHTYPE) test: cd tests &amp;&amp; ${MAKE} test clean: rm -f ${O} $(MACHTYPE)/jkweb.a cd tests &amp;&amp; ${MAKE} clean tags: etags ../inc/*.h ../lib/*.h ../lib/*.c ../hg/inc/*.h ../hg/lib/*.h ../hg/lib/*.c ../hg/hgTracks/*.c ../hg/hgc/*.c ../hg/hgTrackUi/*.c </code></pre>
    singulars
    1. PO
      singulars
      1. PTAnswer
    1. This table or related slice is empty.
    1. PTQuestion
    1. USzjk
    1. USzjk
    plurals
    1. This table or related slice is empty.
    1. This table or related slice is empty.
    1. This table or related slice is empty.
    1. PO
      singulars
      1. PTAnswer
    1. VO
      singulars
      1. POMissing MACHTYPE in makefile
      1. This table or related slice is empty.
      1. VTUpMod
    1. COCould you please show us the whole makefile?
      singulars
      1. POMissing MACHTYPE in makefile
      1. USBeta
    2. CODid you `export` the `MACHTYPE` variable in your shell?
      singulars
      1. POMissing MACHTYPE in makefile
      1. USReinier Torenbeek
    3. COWhen you say that you echo MACHTYPE, do you mean that you do it within the makefile, or from the command line?
      singulars
      1. POMissing MACHTYPE in makefile
      1. USBeta
 

Querying!

 
Guidance
A row detail

Detail views are divided into sections. All the information in the data section comes from columns in the selected row. The other sections display data from other, related rows.

Related data can be related in a to-one or a to-many fashion. Captions of data related in a to-many fashion link to a list view showing a filtered view of the table.

Try moving around until you find a non-empty to-many entry and click on the label to get to one. You can move back to the root by clicking on the database name in the header.

SQuiL has stopped working due to an internal error.

If you are curious you may find further information in the browser console, which is accessible through the devtools (F12).

Reload