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    <p>Building on matt b's answer. Here's some examples of how to use the referenced plugins. Note the executions are bound to the integration-test phase to ensure the jar has been created before attempting to package it.</p> <p>The <a href="http://mojo.codehaus.org/appassembler/appassembler-maven-plugin/" rel="nofollow noreferrer">appassembler-maven-plugin</a> will generate batch/shell files, download the dependencies (in this example to the lib directory), and place all the contents in target/appassembler</p> <pre><code> &lt;plugin&gt; &lt;groupId&gt;org.codehaus.mojo&lt;/groupId&gt; &lt;artifactId&gt;appassembler-maven-plugin&lt;/artifactId&gt; &lt;version&gt;1.0&lt;/version&gt; &lt;executions&gt; &lt;execution&gt; &lt;id&gt;assemble-standalone&lt;/id&gt; &lt;phase&gt;integration-test&lt;/phase&gt; &lt;goals&gt; &lt;goal&gt;assemble&lt;/goal&gt; &lt;!--if you only want to create the repo and skip script generation, use this goal instead--&gt; &lt;!--goal&gt;create-repository&lt;/goal--&gt; &lt;/goals&gt; &lt;configuration&gt; &lt;programs&gt; &lt;program&gt; &lt;mainClass&gt;name.seller.rich.Foo&lt;/mainClass&gt; &lt;name&gt;foo&lt;/name&gt; &lt;/program&gt; &lt;/programs&gt; &lt;platforms&gt; &lt;platform&gt;windows&lt;/platform&gt; &lt;platform&gt;unix&lt;/platform&gt; &lt;/platforms&gt; &lt;repositoryLayout&gt;flat&lt;/repositoryLayout&gt; &lt;repositoryName&gt;lib&lt;/repositoryName&gt; &lt;/configuration&gt; &lt;/execution&gt; &lt;/executions&gt; &lt;/plugin&gt; </code></pre> <p>The <a href="http://maven.apache.org/plugins/maven-assembly-plugin/" rel="nofollow noreferrer">assembly plugin</a> can be used to package the appassembler output into a zip:</p> <pre><code>&lt;profiles&gt; &lt;profile&gt; &lt;id&gt;archive&lt;/id&gt; &lt;build&gt; &lt;plugins&gt; &lt;plugin&gt; &lt;artifactId&gt;maven-assembly-plugin&lt;/artifactId&gt; &lt;version&gt;2.2-beta-2&lt;/version&gt; &lt;executions&gt; &lt;execution&gt; &lt;phase&gt;integration-test&lt;/phase&gt; &lt;goals&gt; &lt;goal&gt;single&lt;/goal&gt; &lt;/goals&gt; &lt;configuration&gt; &lt;descriptors&gt; &lt;descriptor&gt;src/main/assembly/archive.xml&lt;/descriptor&gt; &lt;/descriptors&gt; &lt;/configuration&gt; &lt;/execution&gt; &lt;/executions&gt; &lt;/plugin&gt; &lt;/plugins&gt; &lt;/build&gt; &lt;/profile&gt; &lt;/profiles&gt; </code></pre> <p>And the assembly descriptor looks something like this:</p> <pre><code>&lt;assembly&gt; &lt;id&gt;archive&lt;/id&gt; &lt;formats&gt; &lt;format&gt;zip&lt;/format&gt; &lt;/formats&gt; &lt;fileSets&gt; &lt;fileSet&gt; &lt;directory&gt;${project.build.directory}/appassembler&lt;/directory&gt; &lt;outputDirectory&gt;/&lt;/outputDirectory&gt; &lt;/fileSet&gt; &lt;/fileSets&gt; &lt;!-- add any other filesets to include docs, readmes, licences etc here --&gt; &lt;/assembly&gt; </code></pre>
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    1. COThis is exactly what I was looking for. I was a bit confused by the binding of it to the integration-test phase but I figured it out: mvn integration-test -P archive Thanks!
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    2. COIf you run mvn install, the integration-test phase will also be executed. It just needs to be after packaging to ensure your jar is built before the application is packaged. So **mvn install -Parchive** will also work.
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    3. COWhy did you exclude the assembly phase by the way? It wont build the bat files if activated-- just copies the libs (ignoring the override of the folder name but putting it flat, which is odd). I switch it to just <goal>assembly</goal> to get the right set up...
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