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copied!<p>There are a number of options out there, each with their own features and drawbacks. If you want to discuss your needs in more detail, I can touch on the specific attributes of each library as it relates to your project:</p> <ul> <li>ImageJ - <a href="http://rsbweb.nih.gov/ij/index.html" rel="nofollow noreferrer">http://rsbweb.nih.gov/ij/index.html</a> -- Note that ImageJ is primarily a self-contained application. However, the underlying API is very easy to use in your own applications without having to invoke the GUI.</li> <li>Fiji - <a href="http://pacific.mpi-cbg.de/wiki/index.php/Main_Page" rel="nofollow noreferrer">http://pacific.mpi-cbg.de/wiki/index.php/Main_Page</a> -- This is ImageJ with a number of additional features. I have no personal experience with this library, but it looks promising.</li> <li>JAI - <a href="http://www.oracle.com/technetwork/articles/javaee/jai-142803.html" rel="nofollow noreferrer">http://www.oracle.com/technetwork/articles/javaee/jai-142803.html</a> -- This is Sun's image processing Java offering. Limited in functionality, but it can be used as a basis for more powerful libraries.</li> <li>jMagick - <a href="http://www.jmagick.org/index.html" rel="nofollow noreferrer">http://www.jmagick.org/index.html</a> -- This is just a Java wrapper around ImageMagick and uses JNI to interface with the ImageMagick API</li> <li>Apache Sanselan - <a href="http://commons.apache.org/imaging/" rel="nofollow noreferrer">http://commons.apache.org/imaging/</a> -- This library mostly does image IO, but it has a handful of features that can facilitate image analysis.</li> <li>JIU (Java Imaging Utilities) - <a href="http://sourceforge.net/projects/jiu/" rel="nofollow noreferrer">http://sourceforge.net/projects/jiu/</a> -- A Java library for loading, editing, analyzing and saving pixel image files.</li> <li>Endrov - <a href="http://www.endrov.net/wiki/index.php?title=Main_Page" rel="nofollow noreferrer">http://www.endrov.net/wiki/index.php?title=Main_Page</a> -- Endrov is a multi-purpose image analysis program. I get the impression that the underlying API is usable outside of the application, but it also seems that not everything is implemented in Java. I have no personal experience with this library and am only throwing it in because it seems to have a number of useful features.</li> </ul>

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