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copied!<p>As far I as know, there is no such thing as a standard project structure for Java per se. However, various tools and IDEs (such as Eclipse) do have a standard structure.</p> <p><a href="http://maven.apache.org/" rel="nofollow">Maven</a>, a build tool for Java, on the other hand has a very clearly defined (default) project structure. There, all Java source files are placed in the <code>src/main/java</code> folder and all resource files (like your config files) are placed in <code>src/main/resources</code>.</p> <p>Here's a very quick introduction to Maven, if you don't know it yet: <a href="http://maven.apache.org/guides/getting-started/maven-in-five-minutes.html" rel="nofollow">Maven in 5 Minutes</a></p> <hr> <p>Regarding your question about packaging with dependencies, here is a snipped from one of my Maven POM files that uses the <a href="http://maven.apache.org/plugins/maven-assembly-plugin/" rel="nofollow">Assembly Plugin</a> to create a JAR file with all dependencies included:</p> <pre class="lang-xml prettyprint-override"><code><plugin> <artifactId>maven-assembly-plugin</artifactId> <configuration> <descriptorRefs> <descriptorRef>jar-with-dependencies</descriptorRef> </descriptorRefs> <archive> <manifest> <mainClass>...</mainClass> </manifest> </archive> </configuration> <executions> <execution> <id>make-assembly</id> <phase>package</phase> <goals> <goal>single</goal> </goals> </execution> </executions> </plugin> </code></pre>

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